Kennel Cough or canine cough is an upper respiratory tract infection caused by both bacteria and virus. It affects the dog’s lungs, windpipe and voice box and is also known as Canine Infectious Tracheobronchitis. The causative agents of kennel cough attack the cilia lining of the respiratory tract (hair-like projections in the lungs), which normally works to keep the airway clear from mucus and dirt.